Related articles:
BLAST
Dynamic programming
Homology (biology)
Bioinformatics
Hidden Markov model
DNA
Protein
Key terms:
alignment
query
fasta
amino acid
residue
phylogenetic
nucleotide
dynamic programming
multiple sequence alignment
query sequence
local alignments
query set
dali
structural alignments
global alignments
pairwise alignments
heuristic
bioinformatics
relatedness
alignment methods
phylogenetic tree
homology
scoring function
protein sequences
related sequences
gap penalty
main diagonal
protein structure
structure prediction
regions of similarity
alignments are often
structurally similar
computationally
cath
conservative substitutions
objective function
genbank
multiple sequence alignment techniques
common ancestor
dna and rna
scoring matrix
sequence regions
sequences in the query set
combinatorial extension
evolutionarily
coalescence
closely related
repetitive sequences
iterative methods
substitution matrix
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